Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs10503864 | chr8:30051213 | C/T | 9.31E-7 | 214 | 0.2 | 18.47 | 15.33 | KM Plot |
| KIRP | rs10509153 | chr10:63371312 | A/G | 0 | 212 | 18.25 | 9 | 1.17 | KM Plot |
| KIRP | rs10509157 | chr10:63467328 | C/T | 0 | 213 | 18.02 | 6.83 | 3.38 | KM Plot |
| KIRP | rs10509306 | chr10:70645697 | C/T | 0.00023 | 214 | 15.2 | 16.93 | 11.43 | KM Plot |
| KIRP | rs10509307 | chr10:70710358 | A/C | 0.000217 | 214 | 11.43 | 16.97 | 15.07 | KM Plot |
| KIRP | rs10509346 | chr10:75596014 | A/G | 0 | 214 | 4.82 | 16.45 | 16.73 | KM Plot |
| KIRP | rs10511178 | chr3:100041703 | T/C | 2.38E-5 | 209 | 16.43 | 18.47 | 4.67 | KM Plot |
| KIRP | rs10533870 | chr16:19841336 | CGAATGAAT/C | 9.3E-5 | 209 | 15.1 | 16.93 | 15.52 | KM Plot |
| KIRP | rs10591465 | chr5:176557460 | CAT/C | 6.72E-7 | 210 | 14.97 | 20.53 | 9.77 | KM Plot |
| KIRP | rs10634106 | chr3:100031854 | A/AAAT | 2.81E-5 | 208 | 16.43 | 18.47 | 4.53 | KM Plot |
| KIRP | rs10647532 | chr10:63384550 | C/CTAT | 0 | 213 | 18.03 | 9 | 1.17 | KM Plot |
| KIRP | rs10651855 | chr16:19843704 | T/TGGAG | 2.01E-6 | 206 | 14.83 | 19.53 | 12.23 | KM Plot |
| KIRP | rs10664606 | chr8:30077830 | A/AAAAG | 7.51E-7 | 213 | 16.43 | 17.52 | 5.05 | KM Plot |
| KIRP | rs10741936 | chr11:22332881 | A/G | 3.22E-6 | 213 | 2.52 | 20.05 | 14.87 | KM Plot |
| KIRP | rs10754262 | chr1:89592522 | C/T | 9.32E-5 | 211 | 10 | 19.47 | 14.53 | KM Plot |